Are you adding hyperlinks to the images that are SmartArt or use the 3D effect in PPT 2007?
If so, see Gabe's post about
PPT 2007.
Quote:
POWERPOINT 2007 COMPATIBILITY
Articulate Presenter 5.3 is compatible with PowerPoint 2007. However, since Presenter 5 was developed well before the release of PowerPoint 2007, it is not always aware of new features added to PowerPoint 2007. As such, some new features unique to PowerPoint 2007 may not translate exactly to Presenter 5.3. Expect future major releases of Articulate Presenter to take advantage of PowerPoint 2007’s new features.
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I found that most of it works fine. What I did with the 3D stuff is I convert it to an image and then import the image. The hyperlinks work.
If that's not the issue let us know. Maybe we can help.